Installing SPRAS

SPRAS provides several convenient ways to use the package, depending on your needs

Using Pixi

If you want to run spras locally on your machine, you can use pixi: 1. Download and Install Pixi 2. Activate the pixi environment

pixi shell

Installing SPRAS with pip

You can also install SPRAS as a package using pip directly from the github repository:

pip install git+https://github.com/Reed-CompBio/spras.git

Getting the SPRAS Docker Image

SPRAS also publishes a Docker image that already holds all the necessary dependencies. Assuming you have Docker installed, you can pull the image from Docker Hub:

docker pull reedcompbio/spras:latest

If you want to pull a specific version of spras, use the version for the image tag name. For example, to get spras v0.5.0:

docker pull reedcompbio/spras:0.5.0